HL_9HA3_022

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

9HA3|1|A|U|747, 9HA3|1|A|A|751, 9HA3|1|A|A|752

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA3_022 not in the Motif Atlas

Homologous match to HL_9DFE_021

Geometric discrepancy: 0.3088

The information below is about HL_9DFE_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

9HA3|1|A|U|744
9HA3|1|A|G|745
9HA3|1|A|U|746
9HA3|1|A|U|747
9HA3|1|A|G|748
9HA3|1|A|A|749
9HA3|1|A|A|750
9HA3|1|A|A|751
9HA3|1|A|A|752
9HA3|1|A|A|753

Current chains

Chain A

23S ribosomal RNA

Nearby chains