HL_9HA4_006

3D structure

PDB id

9HA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.26 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

9HA4|1|A|A|196, 9HA4|1|A|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA4_006 not in the Motif Atlas

Homologous match to HL_9DFE_005

Geometric discrepancy: 0.4516

The information below is about HL_9DFE_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9HA4|1|A|G|194
9HA4|1|A|A|195
9HA4|1|A|A|196
9HA4|1|A|A|197
9HA4|1|A|C|198
9HA4|1|A|A|199
9HA4|1|A|U|200
9HA4|1|A|C|201

Current chains

Chain A

23S ribosomal RNA

Nearby chains