HL_9HA6_015

3D structure

PDB id

9HA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mature 50S subunit supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UUAG

Length

4 nucleotides

Bulged bases

9HA6|1|A|A|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA6_015 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3452

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

9HA6|1|A|U|545
9HA6|1|A|U|546
9HA6|1|A|A|547
9HA6|1|A|G|548

Current chains

Chain A

23S ribosomal rRNA

Nearby chains