HL_9HAL_022

3D structure

PDB id

9HAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.49 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

9HAL|1|A|U|958, 9HAL|1|A|C|961

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HAL_022 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.4482

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

9HAL|1|A|U|955
9HAL|1|A|G|956
9HAL|1|A|C|957
9HAL|1|A|U|958
9HAL|1|A|A|959
9HAL|1|A|A|960
9HAL|1|A|C|961
9HAL|1|A|G|962

Current chains

Chain A

23S ribosomal RNA

Nearby chains