HL_9HAM_020

3D structure

PDB id

9HAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

C_(L29)-/(L22)- precursor supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

5.06 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

9HAM|1|A|U|646

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HAM_020 not in the Motif Atlas

Homologous match to HL_4WF9_021

Geometric discrepancy: 0.5224

The information below is about HL_4WF9_021

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

9HAM|1|A|U|641
9HAM|1|A|U|642
9HAM|1|A|A|643
9HAM|1|A|A|644
9HAM|1|A|C|645
9HAM|1|A|U|646
9HAM|1|A|G|647

Current chains

Chain A

23S ribosomal RNA

Nearby chains