HL_9HAM_024

3D structure

PDB id

9HAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

C_(L29)-/(L22)- precursor supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

5.06 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

9HAM|1|A|U|1173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HAM_024 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3652

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

9HAM|1|A|C|1172
9HAM|1|A|U|1173
9HAM|1|A|U|1174
9HAM|1|A|A|1175
9HAM|1|A|U|1176
9HAM|1|A|G|1177

Current chains

Chain A

23S ribosomal RNA

Nearby chains