HL_9HLZ_062
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUUCGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9HLZ|1|r|U|858
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HLZ_062 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.2061
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9HLZ|1|r|G|851
9HLZ|1|r|A|852
9HLZ|1|r|U|853
9HLZ|1|r|U|854
9HLZ|1|r|C|855
9HLZ|1|r|G|856
9HLZ|1|r|A|857
9HLZ|1|r|U|858
9HLZ|1|r|A|859
9HLZ|1|r|C|860
9HLZ|1|r|C|861
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- Small ribosomal subunit protein uS11m
- Chain T
- Small ribosomal subunit protein bS21m
- Chain t
- Transfer RNA; tRNA
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