HL_9HUS_035
3D structure
- PDB id
- 9HUS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUGAAAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HUS_035 not in the Motif Atlas
- Homologous match to HL_7A0S_032
- Geometric discrepancy: 0.1834
- The information below is about HL_7A0S_032
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
9HUS|1|b|G|1281
9HUS|1|b|U|1282
9HUS|1|b|G|1283
9HUS|1|b|A|1284
9HUS|1|b|A|1285
9HUS|1|b|A|1286
9HUS|1|b|A|1287
9HUS|1|b|G|1288
9HUS|1|b|C|1289
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain n
- Large ribosomal subunit protein bL17
- Chain s
- Large ribosomal subunit protein uL22
Coloring options: