HL_9HUS_039

3D structure

PDB id

9HUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

9HUS|1|b|G|1452, 9HUS|1|b|A|1453, 9HUS|1|b|C|1454

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HUS_039 not in the Motif Atlas

Geometric match to HL_8B0X_064

Geometric discrepancy: 0.3124

The information below is about HL_8B0X_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_00557.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9HUS|1|b|C|1451
9HUS|1|b|G|1452
9HUS|1|b|A|1453
9HUS|1|b|C|1454
9HUS|1|b|G|1455
9HUS|1|b|G|1456
9HUS|1|b|U|1457
9HUS|1|b|U|1458
9HUS|1|b|G|1459

Current chains

Chain b

23S rRNA

Nearby chains

Chain n

Large ribosomal subunit protein bL17