HL_9I5T_032
3D structure
- PDB id
- 9I5T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit of P. gingivalis ribosome with Lefamulin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 9I5T|1|A|U|1965
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9I5T_032 not in the Motif Atlas
- Geometric match to HL_8B0X_077
- Geometric discrepancy: 0.0545
- The information below is about HL_8B0X_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33350.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9I5T|1|A|G|1959
9I5T|1|A|G|1960
9I5T|1|A|U|1961
9I5T|1|A|A|1962
9I5T|1|A|A|1963
9I5T|1|A|G|1964
9I5T|1|A|U|1965
9I5T|1|A|U|1966
9I5T|1|A|C|1967
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain N
- Large ribosomal subunit protein uL14
Coloring options: