HL_9JMK_006
3D structure
- PDB id
- 9JMK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S Ribosomal Subunit precursor state III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 9JMK|1|A|A|196, 9JMK|1|A|A|199
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9JMK_006 not in the Motif Atlas
- Homologous match to HL_7A0S_006
- Geometric discrepancy: 0.1613
- The information below is about HL_7A0S_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
9JMK|1|A|G|194
9JMK|1|A|A|195
9JMK|1|A|A|196
9JMK|1|A|A|197
9JMK|1|A|C|198
9JMK|1|A|A|199
9JMK|1|A|U|200
9JMK|1|A|C|201
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain X
- 50S ribosomal protein L28
Coloring options: