HL_9JSR_006

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

9JSR|1|A|A|196, 9JSR|1|A|A|199

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9JSR_006 not in the Motif Atlas

Homologous match to HL_7A0S_006

Geometric discrepancy: 0.4094

The information below is about HL_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

9JSR|1|A|G|194
9JSR|1|A|A|195
9JSR|1|A|A|196
9JSR|1|A|A|197
9JSR|1|A|C|198
9JSR|1|A|A|199
9JSR|1|A|U|200
9JSR|1|A|C|201

Current chains

Chain A

23S Ribosomal RNA

Nearby chains