HL_9K0Z_074

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CGACAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9K0Z_074 not in the Motif Atlas

Geometric match to HL_5J7L_167

Geometric discrepancy: 0.1181

The information below is about HL_5J7L_167

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9K0Z|1|h|C|1478
9K0Z|1|h|G|1479
9K0Z|1|h|A|1480
9K0Z|1|h|C|1481
9K0Z|1|h|A|1482
9K0Z|1|h|G|1483

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain Y

Large ribosomal subunit protein bL28

Chain d

Large ribosomal subunit protein bL34