HL_9MKK_091
3D structure
- PDB id
- 9MKK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of arbekacin bound Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 9MKK|1|b|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9MKK_091 not in the Motif Atlas
- Geometric match to HL_9DFE_068
- Geometric discrepancy: 0.176
- The information below is about HL_9DFE_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9MKK|1|b|C|38
9MKK|1|b|A|39
9MKK|1|b|U|40
9MKK|1|b|G|41
9MKK|1|b|C|42
9MKK|1|b|C|43
9MKK|1|b|G|44
Current chains
- Chain b
- 5S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L31
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- Large ribosomal subunit protein uL5
- Chain n
- Large ribosomal subunit protein uL18
Coloring options: