HL_9MNC_050

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

9MNC|1|L5|A|3876, 9MNC|1|L5|A|3877, 9MNC|1|L5|C|3878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|G|3873
9MNC|1|L5|G|3874
9MNC|1|L5|G|3875
9MNC|1|L5|A|3876
9MNC|1|L5|A|3877
9MNC|1|L5|C|3878
9MNC|1|L5|G|3879
9MNC|1|L5|G|3880
9MNC|1|L5|G|3881
9MNC|1|L5|C|3882

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LI

Large ribosomal subunit protein eL32