HL_9N9J_041

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCAGCAG

Length

8 nucleotides

Bulged bases

9N9J|1|L5|C|2794, 9N9J|1|L5|G|2796, 9N9J|1|L5|A|2798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|C|2792
9N9J|1|L5|G|2793
9N9J|1|L5|C|2794
9N9J|1|L5|A|2795
9N9J|1|L5|G|2796
9N9J|1|L5|C|2797
9N9J|1|L5|A|2798
9N9J|1|L5|G|2799

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4

Chain LP

Large ribosomal subunit protein uL22

Chain Lj

Large ribosomal subunit protein eL37

Chain Ll

Large ribosomal subunit protein eL39

Chain y3

Endoplasmin