HL_9N9J_065

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

9N9J|1|L5|G|4694, 9N9J|1|L5|C|4698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|C|4688
9N9J|1|L5|U|4689
9N9J|1|L5|G|4690
9N9J|1|L5|A|4691
9N9J|1|L5|A|4692
9N9J|1|L5|C|4693
9N9J|1|L5|G|4694
9N9J|1|L5|C|4695
9N9J|1|L5|C|4696
9N9J|1|L5|U|4697
9N9J|1|L5|C|4698
9N9J|1|L5|U|4699
9N9J|1|L5|A|4700
9N9J|1|L5|A|4701
9N9J|1|L5|G|4702

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LH

Large ribosomal subunit protein uL6

Chain LO

Large ribosomal subunit protein uL13

Chain Lm

Ubiquitin-60S ribosomal protein L40