HL_9NDP_106
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 9NDP|1|K|A|1253
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NDP_106 not in the Motif Atlas
- Homologous match to HL_9H3G_099
- Geometric discrepancy: 0.1195
- The information below is about HL_9H3G_099
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9NDP|1|K|G|1245
9NDP|1|K|A|1246
9NDP|1|K|C|1247
9NDP|1|K|U|1248
9NDP|1|K|C|1249
9NDP|1|K|A|1250
9NDP|1|K|A|1251
9NDP|1|K|C|1252
9NDP|1|K|A|1253
9NDP|1|K|C|1254
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 9
- eS29
- Chain GG
- uS10
- Chain UU
- uS9
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