HL_9NJV_075
3D structure
- PDB id
- 9NJV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex (bL33 absent)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NJV_075 not in the Motif Atlas
- Homologous match to HL_5J7L_007
- Geometric discrepancy: 0.1267
- The information below is about HL_5J7L_007
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
9NJV|1|R3|U|296
9NJV|1|R3|G|297
9NJV|1|R3|A|298
9NJV|1|R3|G|299
9NJV|1|R3|A|300
9NJV|1|R3|G|301
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain sd
- 30S ribosomal protein S4
- Chain se
- Small ribosomal subunit protein uS5
- Chain sl
- Small ribosomal subunit protein uS12
- Chain sq
- Small ribosomal subunit protein uS17
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