HL_9NO7_067
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NO7_067 not in the Motif Atlas
- Geometric match to HL_8CRE_191
- Geometric discrepancy: 0.1323
- The information below is about HL_8CRE_191
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73535.1
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9NO7|1|a|U|12
9NO7|1|a|U|13
9NO7|1|a|U|14
9NO7|1|a|G|15
9NO7|1|a|A|16
9NO7|1|a|U|17
9NO7|1|a|C|18
9NO7|1|a|C|19
9NO7|1|a|U|20
9NO7|1|a|G|21
9NO7|1|a|G|22
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
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