HL_9OFV_003
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9OFV_003 not in the Motif Atlas
- Geometric match to HL_9DFE_007
- Geometric discrepancy: 0.0701
- The information below is about HL_9DFE_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_76371.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9OFV|1|f|C|90
9OFV|1|f|G|91
9OFV|1|f|G|92
9OFV|1|f|C|93
9OFV|1|f|G|94
9OFV|1|f|A|95
9OFV|1|f|G|96
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain 4
- 60S ribosomal protein L18-A
- Chain N
- 60S ribosomal protein L28
- Chain b
- 60S ribosomal protein L42-A
- Chain t
- 60S ribosomal protein L13-A
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