HL_9OFV_026
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- GGAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9OFV_026 not in the Motif Atlas
- Geometric match to HL_8P9A_138
- Geometric discrepancy: 0.075
- The information below is about HL_8P9A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9OFV|1|f|G|1148
9OFV|1|f|G|1149
9OFV|1|f|A|1150
9OFV|1|f|U|1151
9OFV|1|f|G|1152
9OFV|1|f|A|1153
9OFV|1|f|A|1154
9OFV|1|f|C|1155
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain R
- Large ribosomal subunit protein eL32
- Chain S
- 60S ribosomal protein L33-A
- Chain h
- 5S ribosomal RNA; 5S rRNA
- Chain o
- 60S ribosomal protein L7-A
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