HL_9OFV_057
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9OFV_057 not in the Motif Atlas
- Geometric match to HL_8CRE_057
- Geometric discrepancy: 0.0549
- The information below is about HL_8CRE_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80599.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9OFV|1|f|U|2724
9OFV|1|f|U|2725
9OFV|1|f|C|2726
9OFV|1|f|A|2727
9OFV|1|f|G|2728
9OFV|1|f|U|2729
9OFV|1|f|G|2730
9OFV|1|f|U|2731
9OFV|1|f|G|2732
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain 4
- 60S ribosomal protein L18-A
- Chain 7
- 60S ribosomal protein L21-A
- Chain N
- 60S ribosomal protein L28
- Chain b
- 60S ribosomal protein L42-A
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