HL_9PGF_031
3D structure
- PDB id
- 9PGF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AGUCCAUAU
- Length
- 9 nucleotides
- Bulged bases
- 9PGF|1|A|U|2960
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PGF_031 not in the Motif Atlas
- Homologous match to HL_7A0S_059
- Geometric discrepancy: 0.2373
- The information below is about HL_7A0S_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9PGF|1|A|A|2958
9PGF|1|A|G|2959
9PGF|1|A|U|2960
9PGF|1|A|C|2961
9PGF|1|A|C|2962
9PGF|1|A|A|2963
9PGF|1|A|U|2964
9PGF|1|A|A|2965
9PGF|1|A|U|2966
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain C
- Translational activator of cytochrome c oxidase 1
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