HL_9PJ7_084
3D structure
- PDB id
- 9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Doxycycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUAAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9PJ7|1|a|A|2213, 9PJ7|1|a|A|2214, 9PJ7|1|a|G|2215
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PJ7_084 not in the Motif Atlas
- Homologous match to HL_7A0S_049
- Geometric discrepancy: 0.1726
- The information below is about HL_7A0S_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9PJ7|1|a|G|2210
9PJ7|1|a|U|2211
9PJ7|1|a|A|2212
9PJ7|1|a|A|2213
9PJ7|1|a|A|2214
9PJ7|1|a|G|2215
9PJ7|1|a|A|2216
9PJ7|1|a|U|2217
9PJ7|1|a|G|2218
9PJ7|1|a|C|2219
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain V
- 50S ribosomal protein bL37
- Chain d
- 50S ribosomal protein L3
- Chain p
- 50S ribosomal protein L20
- Chain q
- Large ribosomal subunit protein bL21
- Chain z
- 50S ribosomal protein L32
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