HL_9PJ7_087
3D structure
- PDB id
- 9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Doxycycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUAAAGGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9PJ7|1|a|A|2450, 9PJ7|1|a|C|2457
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PJ7_087 not in the Motif Atlas
- Homologous match to HL_7A0S_053
- Geometric discrepancy: 0.1202
- The information below is about HL_7A0S_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9PJ7|1|a|C|2446
9PJ7|1|a|U|2447
9PJ7|1|a|A|2448
9PJ7|1|a|A|2449
9PJ7|1|a|A|2450
9PJ7|1|a|G|2451
9PJ7|1|a|G|2452
9PJ7|1|a|G|2453
9PJ7|1|a|U|2454
9PJ7|1|a|A|2455
9PJ7|1|a|A|2456
9PJ7|1|a|C|2457
9PJ7|1|a|G|2458
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L16
- Chain v
- 50S ribosomal protein L27
Coloring options: