HL_9PR4_024

3D structure

PDB id

9PR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUACCCUAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PR4_024 not in the Motif Atlas

Geometric match to HL_9DFE_046

Geometric discrepancy: 0.3946

The information below is about HL_9DFE_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82185.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

9PR4|1|A|G|2574
9PR4|1|A|U|2575
9PR4|1|A|A|2576
9PR4|1|A|C|2577
9PR4|1|A|C|2578
9PR4|1|A|C|2579
9PR4|1|A|U|2580
9PR4|1|A|A|2581
9PR4|1|A|A|2582
9PR4|1|A|C|2583

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains