HL_9PR4_032
3D structure
- PDB id
- 9PR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- AGUCCAUAU
- Length
- 9 nucleotides
- Bulged bases
- 9PR4|1|A|U|2960
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PR4_032 not in the Motif Atlas
- Homologous match to HL_7A0S_059
- Geometric discrepancy: 0.2509
- The information below is about HL_7A0S_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9PR4|1|A|A|2958
9PR4|1|A|G|2959
9PR4|1|A|U|2960
9PR4|1|A|C|2961
9PR4|1|A|C|2962
9PR4|1|A|A|2963
9PR4|1|A|U|2964
9PR4|1|A|A|2965
9PR4|1|A|U|2966
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain C
- Translational activator of cytochrome c oxidase 1
- Chain N
- 39S ribosomal protein L16, mitochondrial
Coloring options: