HL_9PSM_033
3D structure
- PDB id
- 9PSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/P-P/E state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- UGCAGCCG
- Length
- 8 nucleotides
- Bulged bases
- 9PSM|1|A|G|3016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PSM_033 not in the Motif Atlas
- Homologous match to HL_7A0S_060
- Geometric discrepancy: 0.1711
- The information below is about HL_7A0S_060
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_46665.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9PSM|1|A|U|3015
9PSM|1|A|G|3016
9PSM|1|A|C|3017
9PSM|1|A|A|3018
9PSM|1|A|G|3019
9PSM|1|A|C|3020
9PSM|1|A|C|3021
9PSM|1|A|G|3022
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain C
- Translational activator of cytochrome c oxidase 1
Coloring options: