HL_9Q2M_097

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

9Q2M|1|9|U|908

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|G|901
9Q2M|1|9|A|902
9Q2M|1|9|U|903
9Q2M|1|9|C|904
9Q2M|1|9|A|905
9Q2M|1|9|G|906
9Q2M|1|9|A|907
9Q2M|1|9|U|908
9Q2M|1|9|A|909
9Q2M|1|9|C|910
9Q2M|1|9|C|911

Current chains

Chain 9

18S rRNA

Nearby chains

Chain 1

NediV ORF

Chain ET

Transfer RNA; tRNA

Chain OO

Small ribosomal subunit protein uS11

Chain PT

P site Ala-tRNA

Chain aa

eS26