HL_9Q2M_097
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9Q2M|1|9|U|908
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q2M_097 not in the Motif Atlas
- Homologous match to HL_9H3G_095
- Geometric discrepancy: 0.3806
- The information below is about HL_9H3G_095
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9Q2M|1|9|G|901
9Q2M|1|9|A|902
9Q2M|1|9|U|903
9Q2M|1|9|C|904
9Q2M|1|9|A|905
9Q2M|1|9|G|906
9Q2M|1|9|A|907
9Q2M|1|9|U|908
9Q2M|1|9|A|909
9Q2M|1|9|C|910
9Q2M|1|9|C|911
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain 1
- NediV ORF
- Chain ET
- Transfer RNA; tRNA
- Chain OO
- Small ribosomal subunit protein uS11
- Chain PT
- P site Ala-tRNA
- Chain aa
- eS26
Coloring options: