HL_9Q6Q_108
3D structure
- PDB id
- 9Q6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-18 triazole derivative and protein Y at 2.90A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GCUUGUC
- Length
- 7 nucleotides
- Bulged bases
- 9Q6Q|1|2A|U|271|||K, 9Q6Q|1|2A|U|271|||N
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q6Q_108 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.3682
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44506.5
- Basepair signature
- cWW-cWW-F
- Number of instances in this motif group
- 7
Unit IDs
9Q6Q|1|2A|G|271|||I
9Q6Q|1|2A|C|271|||J
9Q6Q|1|2A|U|271|||K
9Q6Q|1|2A|U|271|||L
9Q6Q|1|2A|G|271|||M
9Q6Q|1|2A|U|271|||N
9Q6Q|1|2A|C|271|||O
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L28
- Chain 2I
- 50S ribosomal protein L9
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