HL_9QEG_031
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GUGAGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QEG_031 not in the Motif Atlas
- Homologous match to HL_9DFE_031
- Geometric discrepancy: 0.0697
- The information below is about HL_9DFE_031
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
9QEG|1|A|G|1318
9QEG|1|A|U|1319
9QEG|1|A|G|1320
9QEG|1|A|A|1321
9QEG|1|A|G|1322
9QEG|1|A|A|1323
9QEG|1|A|A|1324
9QEG|1|A|U|1325
9QEG|1|A|C|1326
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- Large ribosomal subunit protein bL17
- Chain Q
- Large ribosomal subunit protein uL22
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