HL_9QEG_039

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGCAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_039 not in the Motif Atlas

Homologous match to HL_9DFE_042

Geometric discrepancy: 0.0673

The information below is about HL_9DFE_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80709.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

9QEG|1|A|C|1779
9QEG|1|A|G|1780
9QEG|1|A|C|1781
9QEG|1|A|A|1782
9QEG|1|A|G|1783

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

Large ribosomal subunit protein bL19