HL_9QEG_045

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

9QEG|1|A|G|2277

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_045 not in the Motif Atlas

Homologous match to HL_4WF9_049

Geometric discrepancy: 0.0895

The information below is about HL_4WF9_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

9QEG|1|A|C|2275
9QEG|1|A|U|2276
9QEG|1|A|G|2277
9QEG|1|A|OMG|2278
9QEG|1|A|G|2279
9QEG|1|A|G|2280
9QEG|1|A|C|2281
9QEG|1|A|G|2282
9QEG|1|A|G|2283

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain K

Large ribosomal subunit protein uL16

Chain U

Large ribosomal subunit protein bL27