HL_9QEG_049

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_049 not in the Motif Atlas

Homologous match to HL_5J7L_191

Geometric discrepancy: 0.0739

The information below is about HL_5J7L_191

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9QEG|1|A|C|2401
9QEG|1|A|G|2402
9QEG|1|A|A|2403
9QEG|1|A|A|2404
9QEG|1|A|A|2405
9QEG|1|A|G|2406

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL33A

Chain M

Large ribosomal subunit protein uL18