HL_9QEG_051
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- AGUUCACAU
- Length
- 9 nucleotides
- Bulged bases
- 9QEG|1|A|U|2500
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QEG_051 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.2163
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9QEG|1|A|A|2498
9QEG|1|A|G|2499
9QEG|1|A|U|2500
9QEG|1|A|U|2501
9QEG|1|A|C|2502
9QEG|1|A|A|2503
9QEG|1|A|C|2504
9QEG|1|A|A|2505
9QEG|1|A|U|2506
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL36
- Chain G
- Large ribosomal subunit protein uL6
- Chain K
- Large ribosomal subunit protein uL16
Coloring options: