HL_9QIW_042
3D structure
- PDB id
- 9QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QIW_042 not in the Motif Atlas
- Homologous match to HL_8CRE_064
- Geometric discrepancy: 0.1263
- The information below is about HL_8CRE_064
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
9QIW|1|L5|C|4603
9QIW|1|L5|G|4604
9QIW|1|L5|A|4605
9QIW|1|L5|G|4606
9QIW|1|L5|A|4607
9QIW|1|L5|G|4608
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CA
- Eukaryotic translation initiation factor 6
- Chain CB
- Nucleolar GTP-binding protein 2
- Chain CD
- GTP-binding protein 4
- Chain CF
- mRNA turnover protein 4 homolog
- Chain CH
- Ribosome biogenesis protein NSA2 homolog
- Chain LH
- 60S ribosomal protein L9
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