HL_9QLO_098

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

9QLO|1|S2|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|S2|G|1054
9QLO|1|S2|A|1055
9QLO|1|S2|U|1056
9QLO|1|S2|C|1057
9QLO|1|S2|A|1058
9QLO|1|S2|G|1059
9QLO|1|S2|A|1060
9QLO|1|S2|U|1061
9QLO|1|S2|A|1062
9QLO|1|S2|C|1063
9QLO|1|S2|C|1064

Current chains

Chain S2

18S rRNA

Nearby chains

Chain CM

full length ARF1-V5-hCMV staller mRNA

Chain CP

Transfer RNA; tRNA

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SO

40S ribosomal protein S14

Chain Sa

40S ribosomal protein S26