HL_9QQA_024
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAC(B8N)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 9QQA|1|A2|A|1254
- QA status
- Modified nucleotides: B8N
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQA_024 not in the Motif Atlas
- Geometric match to HL_8P9A_215
- Geometric discrepancy: 0.1419
- The information below is about HL_8P9A_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9QQA|1|A2|G|1246
9QQA|1|A2|A|1247
9QQA|1|A2|C|1248
9QQA|1|A2|B8N|1249
9QQA|1|A2|C|1250
9QQA|1|A2|A|1251
9QQA|1|A2|A|1252
9QQA|1|A2|C|1253
9QQA|1|A2|A|1254
9QQA|1|A2|C|1255
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AC
- Ubiquitin-ribosomal protein eS31 fusion protein
- Chain AG
- Small ribosomal subunit protein uS14
- Chain AT
- Transfer RNA; tRNA
- Chain Ao
- Small ribosomal subunit protein uS19
- Chain Ap
- Small ribosomal subunit protein uS9
- Chain At
- Small ribosomal subunit protein uS10
Coloring options: