HL_9QQA_083

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUUC(OMG)G

Length

6 nucleotides

Bulged bases

9QQA|1|B5|U|2717

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQA_083 not in the Motif Atlas

Geometric match to HL_8P9A_154

Geometric discrepancy: 0.1041

The information below is about HL_8P9A_154

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

9QQA|1|B5|C|2715
9QQA|1|B5|U|2716
9QQA|1|B5|U|2717
9QQA|1|B5|C|2718
9QQA|1|B5|OMG|2719
9QQA|1|B5|G|2720

Current chains

Chain B5

28S rRNA

Nearby chains

Chain A2

Small subunit ribosomal RNA; SSU rRNA

Chain Az

Small ribosomal subunit protein eS32

Chain Bp

60S ribosomal protein L37a