HL_9QQA_085
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- (PSU)UUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9QQA|1|B5|A|3374, 9QQA|1|B5|A|3375, 9QQA|1|B5|U|3376, 9QQA|1|B5|A|3380
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQA_085 not in the Motif Atlas
- Geometric match to HL_8CRE_044
- Geometric discrepancy: 0.179
- The information below is about HL_8CRE_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
9QQA|1|B5|PSU|3371
9QQA|1|B5|U|3372
9QQA|1|B5|U|3373
9QQA|1|B5|A|3374
9QQA|1|B5|A|3375
9QQA|1|B5|U|3376
9QQA|1|B5|U|3377
9QQA|1|B5|A|3378
9QQA|1|B5|A|3379
9QQA|1|B5|A|3380
9QQA|1|B5|A|3381
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BA
- Large ribosomal subunit protein uL2
- Chain BK
- Nascent chain
- Chain Bj
- Ribosomal protein L37
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