HL_9QQB_018

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AGGUGAAAU(PSU)

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_018 not in the Motif Atlas

Geometric match to HL_8CRE_210

Geometric discrepancy: 0.0931

The information below is about HL_8CRE_210

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

9QQB|1|A2|A|958
9QQB|1|A2|G|959
9QQB|1|A2|G|960
9QQB|1|A2|U|961
9QQB|1|A2|G|962
9QQB|1|A2|A|963
9QQB|1|A2|A|964
9QQB|1|A2|A|965
9QQB|1|A2|U|966
9QQB|1|A2|PSU|967

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Aa

40S ribosomal protein S3a

Chain Ae

Small ribosomal subunit protein uS7

Chain An

Small ribosomal subunit protein uS11