HL_9QQB_063

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GGUAAGC

Length

7 nucleotides

Bulged bases

9QQB|1|B5|G|1808

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_063 not in the Motif Atlas

Geometric match to HL_8CRE_024

Geometric discrepancy: 0.1014

The information below is about HL_8CRE_024

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9QQB|1|B5|G|1803
9QQB|1|B5|G|1804
9QQB|1|B5|U|1805
9QQB|1|B5|A|1806
9QQB|1|B5|A|1807
9QQB|1|B5|G|1808
9QQB|1|B5|C|1809

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BI

60S ribosomal protein L10