HL_9QQB_068

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGCGGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_068 not in the Motif Atlas

Geometric match to HL_8CRE_029

Geometric discrepancy: 0.1012

The information below is about HL_8CRE_029

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9QQB|1|B5|C|2160
9QQB|1|B5|G|2161
9QQB|1|B5|C|2162
9QQB|1|B5|G|2163
9QQB|1|B5|G|2164
9QQB|1|B5|G|2165

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Be

Ribosomal protein L32

Chain Br

[histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B