HL_9QQB_095

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UUCAG(OMU)ACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQB_095 not in the Motif Atlas

Geometric match to HL_8CRE_057

Geometric discrepancy: 0.152

The information below is about HL_8CRE_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80599.2

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9QQB|1|B5|U|4047
9QQB|1|B5|U|4048
9QQB|1|B5|C|4049
9QQB|1|B5|A|4050
9QQB|1|B5|G|4051
9QQB|1|B5|OMU|4052
9QQB|1|B5|A|4053
9QQB|1|B5|C|4054
9QQB|1|B5|G|4055

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BQ

eL18

Chain BT

60S ribosomal protein L21

Chain Ba

60S ribosomal protein L27a

Chain Bo

Large ribosomal subunit protein eL42