HL_9QQB_097
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- U(PSU)UGGGUUU(PSU)A
- Length
- 11 nucleotides
- Bulged bases
- 9QQB|1|B5|U|4100
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQB_097 not in the Motif Atlas
- Geometric match to HL_7JRT_001
- Geometric discrepancy: 0.3349
- The information below is about HL_7JRT_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67407.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9QQB|1|B5|U|4098
9QQB|1|B5|PSU|4099
9QQB|1|B5|U|4100
9QQB|1|B5|G|4101
9QQB|1|B5|G|4102
9QQB|1|B5|G|4103
9QQB|1|B5|U|4104
9QQB|1|B5|U|4105
9QQB|1|B5|U|4106
9QQB|1|B5|PSU|4107
9QQB|1|B5|A|4108
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BL
- Large ribosomal subunit protein eL13
- Chain Ba
- 60S ribosomal protein L27a
- Chain Bi
- 60S ribosomal protein L36
- Chain Bo
- Large ribosomal subunit protein eL42
- Chain Bv
- Ribosomal protein uL1
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