HL_9QQL_079
3D structure
- PDB id
- 9QQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPS15 P131 Mutant Ribosome POST translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQL_079 not in the Motif Atlas
- Homologous match to HL_7VNV_002
- Geometric discrepancy: 0.1297
- The information below is about HL_7VNV_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9QQL|1|Bv|A|31
9QQL|1|Bv|U|32
9QQL|1|Bv|U|33
9QQL|1|Bv|G|34
9QQL|1|Bv|A|35
9QQL|1|Bv|A|36
9QQL|1|Bv|A|37
9QQL|1|Bv|A|38
9QQL|1|Bv|U|39
Current chains
- Chain Bv
- transfer RNA
Nearby chains
- Chain Bx
- messenger RNA
- Chain m2
- Small subunit ribosomal RNA; SSU rRNA
- Chain n2
- Transfer RNA; tRNA
- Chain y2
- Small ribosomal subunit protein uS9
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