HL_9QSA_074
3D structure
- PDB id
- 9QSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-1 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QSA_074 not in the Motif Atlas
- Homologous match to HL_7K98_002
- Geometric discrepancy: 0.3699
- The information below is about HL_7K98_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9QSA|1|Bz|A|31
9QSA|1|Bz|U|32
9QSA|1|Bz|U|33
9QSA|1|Bz|G|34
9QSA|1|Bz|A|35
9QSA|1|Bz|A|36
9QSA|1|Bz|A|37
9QSA|1|Bz|A|38
9QSA|1|Bz|U|39
Current chains
- Chain Bz
- transfer RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain Bx
- messenger RNA
- Chain E3
- Small ribosomal subunit protein uS12
- Chain m2
- Small subunit ribosomal RNA; SSU rRNA
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