HL_9R3A_023

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

9R3A|1|A|G|1068

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_023 not in the Motif Atlas

Homologous match to HL_6CZR_096

Geometric discrepancy: 0.2215

The information below is about HL_6CZR_096

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

9R3A|1|A|G|1063
9R3A|1|A|U|1064
9R3A|1|A|U|1065
9R3A|1|A|A|1066
9R3A|1|A|A|1067
9R3A|1|A|G|1068
9R3A|1|A|U|1069
9R3A|1|A|C|1070

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain U

Small ribosomal subunit protein bS21

Chain V

Small ribosomal subunit protein uS2