HL_9R3A_033

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CAGUUGGUAG

Length

10 nucleotides

Bulged bases

9R3A|1|Z|U|16, 9R3A|1|Z|U|17, 9R3A|1|Z|G|18, 9R3A|1|Z|G|19, 9R3A|1|Z|U|20

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_033 not in the Motif Atlas

Homologous match to HL_7YSE_001

Geometric discrepancy: 0.1408

The information below is about HL_7YSE_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R3A|1|Z|C|13
9R3A|1|Z|A|14
9R3A|1|Z|G|15
9R3A|1|Z|U|16
9R3A|1|Z|U|17
9R3A|1|Z|G|18
9R3A|1|Z|G|19
9R3A|1|Z|U|20
9R3A|1|Z|A|21
9R3A|1|Z|G|22

Current chains

Chain Z

P-site tRNA

Nearby chains

Chain a

Large subunit ribosomal RNA; LSU rRNA

Chain f

Large ribosomal subunit protein uL5